Package: ipmr 0.0.7

Sam Levin

ipmr: Integral Projection Models

Flexibly implements Integral Projection Models using a mathematical(ish) syntax. This package will not help with the vital rate modeling process, but will help convert those regression models into an IPM. 'ipmr' handles density dependence and environmental stochasticity, with a couple of options for implementing the latter. In addition, provides functions to avoid unintentional eviction of individuals from models. Additionally, provides model diagnostic tools, plotting functionality, stochastic/deterministic simulations, and analysis tools. Integral projection models are described in depth by Easterling et al. (2000) <doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013) <doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>. Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.

Authors:Sam Levin [aut, cre], Aldo Compagnoni [aut], Dylan Childs [aut], Sanne Evers [aut], Roberto Salguero-Gomez [aut], Tiffany Knight [aut], Eric Scott [ctb]

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Bug tracker:https://github.com/padrinodb/ipmr/issues

On CRAN:

demographyintegral-projection-models

53 exports 6 stars 1.54 score 8 dependencies 1 dependents 60 scripts 355 downloads

Last updated 2 years agofrom:3bc354e118. Checks:OK: 1 NOTE: 8. Indexed: yes.

Exports:.data%^%%>%collapse_pop_stateconv_plotdefine_domainsdefine_env_statedefine_impldefine_kerneldefine_pop_statediscrete_extremadiscretize_pop_vectordomainsenexprenexprsenquoenquosensymensymsexprformat_mega_kernelinit_ipmint_meshipm_to_dfis_conv_to_asymptotickernel_formulaekernel_formulae<-lambdaleft_evleft_multmake_impl_args_listmake_ipmmake_ipm_reportmake_ipm_report_bodymake_iter_kernelmat_powermean_kernelnew_fun_formparametersparameters<-pop_statequoquo_namequosright_evright_multsymsymstruncated_distributionsuse_vr_modelvital_rate_exprsvital_rate_exprs<-vital_rate_funs

Dependencies:cligluelifecyclemagrittrpurrrRcpprlangvctrs